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Changelog

epiphytoolR 0.0.3

development version 0.0.3

  • Potential breaking changes
  • Remove capture warnings functions and format_weather()
  • merge_axf_weather() changed to merge_weather() and now reads and merges JSON weather data.
  • update the README, to give more information about the package and how to contribute ### format_weather() fixes and improvements
  • format_weather() now will fill NA values using openmeteo package
  • Missing times are now filled, adding NA values for any weather data columns.
  • bug fixes to get_weather_coefs()
  • format_weather returns which models are compliant with the output weather.
  • print_warnings argument removed argument verbose() handles messages and warnings

epiphytoolR 0.0.2

  • Make pkgdown site

  • R function to generate mock raw bom file for testing and examples make_bom_data()

  • tests for get_weather_coefs()

  • patch some bugs to tests and allow calc_estimated_weather to return rh and temp

  • calc_estimated_weather() now returns epiphy.weather classed data.tables eliminating the need for subsequent parsing through format_weather()

  • new functions impute_temp() and impute_rh() for imputing temperatures and relative humidity using a impute_fill() on a rolling window function

  • Add README.md

  • calc_estimated_weather.R()

    • Permit n_stations argument to input a integer of single length to provide the number of stations.
    • More detailed error and warning messages, and checks on min and max temperatures
    • add na.rm argument for cases where NA data can’t be removed manually

  • Add functions for estimating future weather for environments.:

  • Better time format detection and more informative format_weather() errors.

  • Add a function fill_time_gaps() that fills time gaps in data.frame with time vector. This is common in many weather data sets to have missing data. This function helps fill the lines which are missing and inserts NAs for any column with variable inputs.

  • New fictional internal dataset bris_weather_obs.csv of weather for testing and practising the use of functions in this package. The format reflect some BOM weather data.

  • format_weather()

    • New feature allows data.checks of specific variable. Previously this was all or nothing.
    • This now accepts relative humidity rh and returns the hourly mean.

epiphytoolR 0.0.1

  • Initialise version 0.0.1 and merge dev branch to main. Package is now a import to many other packages and should be incremented to not under development

epiphytoolR 0.0.0.9001

  • Initialise news file
  • Added scripts to download BOM observational data by state from the FTP server. See help(get_bom_observations)
  • Bug fix in format_weather() see issue #10. Detects midnight datetime and corrects HMS formatting
  • Bug fix in format_weather() see issue #11. Internal function to fill missing times would not work correctly when formatting weather from multiple stations.